Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIKNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSSKDASTKKEAQYIP--KGFFDPYSSNLNHWDSTF
3NLP Chain:A ((22-78))
------------LKSTLETGCTEHICMGSIVLP-----------TKDQLFPLAKEFLDQYYSSIKRFGSKA
General information:
TITO was launched using:
RESULT:
Template:
3NLP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3461 for 155 contacts (22.3/contact) +
2D Compatibility (PS) -4302 + (NN) 2075 + (LL) 1032
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -1634.0 ( -10.54 by residue)
QMean score : -0.048
(partial model without unconserved sides chains):
PDB file :
Tito_3NLP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NLP-query.scw
PDB file :
Tito_Scwrl_3NLP.pdb
: