Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLDIKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQLIYESEVEKL
3LQM Chain:A ((134-186))
------------TYNVQYWKQGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHDETV
General information:
TITO was launched using:
RESULT:
Template:
3LQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1878 for 253 contacts (-7.4/contact) +
2D Compatibility (PS) -5307 + (NN) 2275 + (LL) 652
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -5808.0 ( -22.96 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_3LQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LQM-query.scw
PDB file :
Tito_Scwrl_3LQM.pdb
: