Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGLMKGDAQDMQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFA-----PFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKP-IYYDNTILDPKTTNMNNMCMFDGYTHYLNLVLVNCPIELSGARELIEESEGVDGAVSKIASSHLCLKALAKGSEPLLHLREKIARLVTQTTTQKV----- |
3J6V Chain:J ((1-201)) | MAVRAVFGALGRRLWQGSKNFSV-------------------------------------------------------SSSRSNIAKNDGFLLSTSMKWVQFSNLHVDVPKDLTKPTITISDEPDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKEL--------GISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRL------------EQLPEHIKKPVWETTPEEKGDSKS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42665 for 1268 contacts (-33.6/contact) +
2D Compatibility (PS) -19558 + (NN) -1963 + (LL) 4612
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -64224.0 ( -50.65 by residue)
QMean score : 0.266
|
|
|