Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGIEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQTTKDPTHATSYGVFAASLNMELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS |
| 1YEW Chain:C ((69-134)) | ----------------------------------------------EGVYGWSAGLDSF--------APEFETYWMNFLYTE-IVLEIVTASILWGYL-------WKTRDRNLAALTPREELRRNFTHLVWLVAYAWAIYWGASYFTEQDGTWHQTIVRDTDFTPSHIIEFYLSYPIYIITGFAAFIYAKTRLPFFAHTFWFMEELFVAPLHYGFVIFGWLALAVM------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 541 for 288 contacts (1.9/contact) +
2D Compatibility (PS) -6855 + (NN) -488 + (LL) 5352
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -3650.0 ( -12.67 by residue)
QMean score : 0.020
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