Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISRKEYVSMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTGIYKA--DIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQI---------PTAFASGVTTMIG--GGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASND-ASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEH-NILPASTNPTIPFTVNTEAEHMDMLMVC----HHLDKSIKEDVQFADSRIRPQTIAAEDTLHDM-----GIFSITSSDSQAMGRVGEVITRT------WQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFAHHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF |
| 1XRF Chain:A ((45-425)) | ---------------------------------------------------------------WMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDK------------NILV-PEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRV-----LPTGTITKGRKGKEIADFYSLKEAGCVAFTDDGSPVMDSSVMRKALELASQLGVPIMDH--------------------------AEEIQIARDGILAQRTGGHVHIQHVSTK--LSLEIIEFFKEKGVKITCEVNPNHLL----------------------DRLALIEGVKRGIIDCFATDHAPHQT--------MPGIIGLQTALPSALELYR----KGI---ISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD---------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99630 for 2354 contacts (-42.3/contact) +
2D Compatibility (PS) -30603 + (NN) 1527 + (LL) 13112
1D Compatibility (HY) -18400 + (ID) 4150
Total energy: -138144.0 ( -58.68 by residue)
QMean score : 0.330
|
|
|