Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
2D35 Chain:A ((1-62))
TEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
General information:
TITO was launched using:
RESULT:
Template:
2D35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15006 for 348 contacts (-43.1/contact) +
2D Compatibility (PS) -6794 + (NN) 92 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -23158.0 ( -66.55 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_2D35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D35-query.scw
PDB file :
Tito_Scwrl_2D35.pdb
: