Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNEKQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQ------NLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLSQ---PQILMVQNYGGALDFSWIFVDKKTYRFRSYLGIALEQGVLLVDTIKTGSFTTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQLGIEMPLVRNVFYTYNNHQERFKPRFNANLSLIVSF |
2K0L Chain:A ((16-168)) | ---------------------------------------------------------------------DNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVN--PYLGFEMG--YDWLGRMAYKGSVDNGAFKAQGV--QLTAKLGYPIT--DDLDIYTRLGGMVWRADSKGNYAST--GVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRFGQED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49734 for 826 contacts (-60.2/contact) +
2D Compatibility (PS) -15481 + (NN) -1382 + (LL) 5396
1D Compatibility (HY) 0 + (ID) 750
Total energy: -61951.0 ( -75.00 by residue)
QMean score : 0.017
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