Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKELILKRIKEARAKHAIQGANPIYRNIIKVEFEDLVEEYKHFQVLNKAELIESAKENLEQAILKALENFQSKKVLHSTDLNLNFEAFKDFTLQPYDKEIEAMREELFEIDTALLHGVCGISSLGMIGAVSSHASPRLLSLITLNCIILLKKESIVRNLS-EGVQALKNQGQNGAL-------PTN----MLLIGGPSRTADIELKTVFGVHGPQKVAVILY |
| 2YNM Chain:C ((89-198)) | -------------------------------------------------------------------------------------------------DRVVKSLLKRRPEIRTLFLVGSCPSE---VIKIDLSRAAERLSSQFNGQVRIL--------NYSGSGIETTFTQGEDGALKALVPLMPSSQEEQLLLAGTLANPVEDRLKTIFNRLGIQKVESFPP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33764 for 529 contacts (-63.8/contact) +
2D Compatibility (PS) -10251 + (NN) 149 + (LL) 9736
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -39880.0 ( -75.39 by residue)
QMean score : 0.107
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