Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFES----LRLPIIKAGLQRIATTPIEL------NDEQMELTEKLLDRIEDDDDVVALYTNIE |
2LQJ Chain:A ((150-225)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27195 for 413 contacts (-65.8/contact) +
2D Compatibility (PS) -6865 + (NN) -1899 + (LL) 11952
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -26307.0 ( -63.70 by residue)
QMean score : 0.408
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