Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRMELKNIISETLNEIEKMAKTIDDGFNTAQKTPSFFKTPSHLQNTPNSKNANTPLEPKNAAKIETQEKITEEKEEAKEIITEEIVQENPTQALIPNER---VFLKGLLERTLVLFKGMQALEEKEALKRLDLVARFLQYQLSVLEKRLESLERENTE |
3IYD Chain:D ((1147-1233)) | -----------------------------------------------------ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20380 for 516 contacts (39.5/contact) +
2D Compatibility (PS) -7751 + (NN) 9712 + (LL) 2784
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 20875.0 ( 40.46 by residue)
QMean score : 0.040
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