Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKG--FRAVKEFLSEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTP--------LLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL |
| 7TIM Chain:A ((57-238)) | ----------------------------------------------------QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVK-DWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 7TIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63080 for 1324 contacts (-47.6/contact) +
2D Compatibility (PS) -18106 + (NN) -6058 + (LL) 4452
1D Compatibility (HY) -12000 + (ID) 3400
Total energy: -98192.0 ( -74.16 by residue)
QMean score : 0.501
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