Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYASLKSIAMHVPSERVKNAEFQQFLDTSDEWIEKRTGIKERRFANDEEKSSDLGVIAAKQAIERAHLTPQDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMYENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESVLDVQISANGNFSNYLYTPRTLKPTPFNAKEEALEPFLRMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLTVHKYGNTSAASIPMAMCEAYEEGRLKKGDLMLLDAFGGGLTWGSALVYFGGI |
4WZU Chain:A ((3-325)) | -QCYAEITGWGKCLPPATLSNHDLSTFLDTSDEWIQSRTGIEQRRISH--VNTSDLATVAAQHAIACAGVSVEEIDLIIVATCSPDSL-IPNIASRVQQNLGIPSAAAFDLNAACTGFLYGLETATRLMQASHYRHALVIGAERLSFYLDWTKRDTAVLFGDGAGAVVLSKTEQ-KVGLQDAQIGCDAQGRDILAVPKFGTAMDRFDADNGYWAF-DFVGKEIFKRAVRGMGAAAQQVLARSGLSTEEIDVVIPHQANIRIIQTLCDLAGIAQDKAFVNIHRYGNTSAATVPIALCEALEQGKIKPHDDLLVAAFGAGLTWGAGHIRWGER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220658 for 3041 contacts (-72.6/contact) +
2D Compatibility (PS) -34216 + (NN) -13807 + (LL) 732
1D Compatibility (HY) -26800 + (ID) 6350
Total energy: -301099.0 ( -99.01 by residue)
QMean score : 0.523
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