Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPKCKNIISSAVVVSVKDLCEEISAFED----LENRLFISDRAHVILPYHAKKDAFKEKSQN---IGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEEKLNA-----HFKAIEPFKKAYDLGENYEKDLMGYFKTYAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGVEFGTTTKRPRRCGWLDLVALKYACALNGCTQLALMKLDVLDGIDAIKVCVAYER-KGERLEAFP---SDLKDCTPIYQTFKGW-EKSVGVRKLDDLEPNAREYIRFIEKEVGVKIGLISTSPEREDTIFL
1QF4 Chain:A ((5-425))---VVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAE---AVDYQK-VLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMIL


General information:
TITO was launched using:
RESULT:

Template: 1QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184544 for 3544 contacts (-52.1/contact) +
2D Compatibility (PS) -43457 + (NN) -9035 + (LL) 392
1D Compatibility (HY) -36000 + (ID) 9650
Total energy: -282294.0 ( -79.65 by residue)
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_1QF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QF4-query.scw
PDB file : Tito_Scwrl_1QF4.pdb: