Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDNTLINLF------ETAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKD--GKAKRVSVFLKSLMFVVGFSLVFL-GVGMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAFLYKTQSVGLASKSNSMQRFYPFLLGM----SFALGWTPCIGPIFTSIVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLER-----ALLFLKSLRKYNRAIEIVS--------GLVLILMGILIMTNSLESLTNFLQN------- |
| 2YXO Chain:A ((1-263)) | MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLEADFHPGTEGFLAQLLRRYPFDY---------VIGSVHYLGAWPLDHPDHQEEYAWRDLKEVFRAYFQEVEKAARSGLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAGLFLDVNTAGLRRPAKEVYPAPALLRRARELGIGLVLGSDAHRPEEVGFAFPEVQALLAGLGFREAYYFVEGSPVAYPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280419 for 1845 contacts (-152.0/contact) +
2D Compatibility (PS) -23946 + (NN) -2428 + (LL) 604
1D Compatibility (HY) -1600 + (ID) 1800
Total energy: -309589.0 ( -167.80 by residue)
QMean score : 0.201
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