Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM
3F9I Chain:A ((2-240))
IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIIS-GSNEEKLKSLGNALKDN-YTIEVCNLANKEEC------SNLISKTSNLDILVCNAG-------------DFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG--GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIK------LNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGMLM
General information:
TITO was launched using:
RESULT:
Template:
3F9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107085 for 1879 contacts (-57.0/contact) +
2D Compatibility (PS) -23423 + (NN) -6735 + (LL) 2480
1D Compatibility (HY) -22400 + (ID) 5200
Total energy: -162363.0 ( -86.41 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3F9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9I-query.scw
PDB file :
Tito_Scwrl_3F9I.pdb
: