Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKRAKTKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHR-LGLSNANTPIKTEEELSDLFKD-----NLSKLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA
1MUY Chain:A ((28-213))
------------------------------KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYA-RARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSW
General information:
TITO was launched using:
RESULT:
Template:
1MUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85526 for 1365 contacts (-62.7/contact) +
2D Compatibility (PS) -19111 + (NN) -8871 + (LL) 2676
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -125182.0 ( -91.71 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1MUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MUY-query.scw
PDB file :
Tito_Scwrl_1MUY.pdb
: