Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
4Z0U Chain:A ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
4Z0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47434 for 1067 contacts (-44.5/contact) +
2D Compatibility (PS) -14426 + (NN) -6937 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3700
Total energy: -80897.0 ( -75.82 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_4Z0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z0U-query.scw
PDB file :
Tito_Scwrl_4Z0U.pdb
: