Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKELESLKNNEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSKVDQQERFKR--LYSTYQYNHQNFILLDVPGIEGSEKKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
4DCV Chain:A ((181-253)) | -------------------------------------------------EHFKNIPETKYNEEVIQFCL--IGRPNVGKSSLVNA--MLGEERVIVSN------DAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24104 for 336 contacts (-71.7/contact) +
2D Compatibility (PS) -6745 + (NN) 349 + (LL) 5408
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -31742.0 ( -94.47 by residue)
QMean score : 0.350
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