Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVIIAANNLCLQYQQNEPVIKHANLRIKRKDFVFISGPSGSGKSTLLRSFYGDLKVFSGKLEVCNINMNNASKSTILDLRKNIGVVFQDYKLIQDYTIEQNIKL-PMVICGIKKEECHLQLEKLLGHIDLRHKANRYPKELSGGEQQRVAMARAMANCPELILADEPTGNLDDYSSDKIWSLLRGMNTQLNATIVVVTHKFPKNFSAYHRKFYIEEGEVYEYS
3C4J Chain:A ((39-239))-------------------VLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLK-AKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEG


General information:
TITO was launched using:
RESULT:

Template: 3C4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90240 for 1574 contacts (-57.3/contact) +
2D Compatibility (PS) -20883 + (NN) -2833 + (LL) 1748
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -134108.0 ( -85.20 by residue)
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_3C4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C4J-query.scw
PDB file : Tito_Scwrl_3C4J.pdb: