Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKELRQKRPLVHNITNYVVAQFVANGLLALGVSPLMSDAIAEMPDLAKISDALAINIGTLNERTILCAKEAIKRY-KALNKPIVLDPVGCSASALRY-DTSLELLESKGISTLRGNAAELGSLVGISCESKGLDSKHSATPIEIVKRAAQKYSVIAVMTGKTDYVSDGKKVL-SITGGSEYLAAITGAGCLHAAACASFLSLKKDPLDSMVQLCAFYKQAAFSAQKKALENNGSNGSFLFYFLDALSLPIELENSLIKEEL |
| 3RTD Chain:A ((316-462)) | ---------------------------------------------ELSKDVDVVAIGPGLGNNEHV---REFVNEFLKTLEKPAVID-----ADAINVLDTSV-LKERKSPAVLTPHPGEMARLVKKTVG----DVKYN---YELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSKG--GSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPEAIRRLK------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50637 for 1080 contacts (-46.9/contact) +
2D Compatibility (PS) -15855 + (NN) -8443 + (LL) 6368
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -79267.0 ( -73.40 by residue)
QMean score : 0.394
|
|
|