Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSTHGLLNKEVRYSNGKLIIGSLEIPVFNSIKDLK-------GVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ--NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIAPDLTFTLENMVKIMGWYDNEWGYSNRLVDMAQFMYHY
1VC2 Chain:A ((1-326))MKVGINGFGRIGRQVFRILHERG-----VEVALINDLTDNKTLAHLLKYDSTYGRFPGAVGYDEENLYVDGKAIRA-TAIKDPREIPWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITAPAKNED-----ITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKVLEKAFGVEKALMTTVHSYTNDQRLLDLPHK-DLRRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTPTGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGKLTKAIGNLVKVFAWYDNEWGYANRVADLVELVLKK


General information:
TITO was launched using:
RESULT:

Template: 1VC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233009 for 2807 contacts (-83.0/contact) +
2D Compatibility (PS) -33148 + (NN) -2575 + (LL) 488
1D Compatibility (HY) -22000 + (ID) 7200
Total energy: -297444.0 ( -105.97 by residue)
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_1VC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VC2-query.scw
PDB file : Tito_Scwrl_1VC2.pdb: