Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESIHHLRQKN
4U5R Chain:A ((1-57))
-PYWEI-FTPENAF-TPDDKEQLSEAITSIYVDYVNLPRFYVVVLFKDMPKETMYVGGKANNNFVRIR
General information:
TITO was launched using:
RESULT:
Template:
4U5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9571 for 297 contacts (-32.2/contact) +
2D Compatibility (PS) -6776 + (NN) -5326 + (LL) 132
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -29141.0 ( -98.12 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_4U5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U5R-query.scw
PDB file :
Tito_Scwrl_4U5R.pdb
: