Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSV-TIKSIKAKLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
1IQO Chain:A ((49-71))
-----QSNHVLFLSSYNSVDEIRKELEEAGAKINHTTLKILEGHL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1IQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1956 for 72 contacts (-27.2/contact) +
2D Compatibility (PS) -2299 + (NN) 658 + (LL) 1552
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -4245.0 ( -58.96 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1IQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQO-query.scw
PDB file :
Tito_Scwrl_1IQO.pdb
: