Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEE-EGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMR-VPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKY-NYGGKKYAISNGFDPM-FKFEHPQ-------KSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRY-KQDIVLLLKGKGPDEKKIKLLAQKLGVKTEF-GFVNSHELLEILKTCTLYAHTAN-------VESEAIACLEAISVGIVPVIANSPLSATRQFALDE-RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3OKP Chain:A ((5-381)) | RKTLVVTNDFPPRIGGIQSYLRDFIATQD--PESIVVFASTQNAEEAHAYDKTLDYEVIRWPRS--V-MLPTPTTAHAMAEIIR--EREIDNVWFGAAAPLALMA-GTAKQAGASKVIASTHGHEVGWSM------L-----PGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGT-SGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143756 for 2988 contacts (-48.1/contact) +
2D Compatibility (PS) -37912 + (NN) -9518 + (LL) 1648
1D Compatibility (HY) -3600 + (ID) 3300
Total energy: -196438.0 ( -65.74 by residue)
QMean score : 0.439
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