Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPE---LMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
3TW2 Chain:A ((17-118))
-TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGL-NKGYRMVVNEGSDGGQSVYHVHLHVLGGRQM
General information:
TITO was launched using:
RESULT:
Template:
3TW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85247 for 682 contacts (-125.0/contact) +
2D Compatibility (PS) -10795 + (NN) -6828 + (LL) 272
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -114148.0 ( -167.37 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_3TW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TW2-query.scw
PDB file :
Tito_Scwrl_3TW2.pdb
: