Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE--DFES----LSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--VQ-MTNNHWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 1Z05 Chain:A ((104-417)) | --NNLGWQFLSMRLGRGYLTIALHELG-GEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAA-QLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGL-PVFVANDTRAWALAEKLFGHS----------QDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQG-K-------RCHCGNYGCLETVASSQAIRDQVTARIQAGEPS--CLATVEEISIEDICAAAA-DGDPLAVDVIQQLGRYLGAAIAIVINLFNPE-KILIGGVINQAKSI-LYP-SIEQCIREQS-LPVYHQDLKLVESRFYKQATMPGAALIKQALYDGLLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176219 for 2488 contacts (-70.8/contact) +
2D Compatibility (PS) -31024 + (NN) -2017 + (LL) 1888
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -212522.0 ( -85.42 by residue)
QMean score : 0.320
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