Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQLQIVPKAQVLKNNTMERSLALALQKVSIPRSTSAHRTLLINHFLEQVILQNIKTIAFRGIIKLTPHNENPLLKPYSAFITLNSIIRACAYCPL
2VE8 Chain:A ((745-811))
EDDPLYDEAVRFVTESRR--------------ASISAVQRKLKIGYNRAARMIEAMEM---AGVVTPMNTNGSREVIAPAPVRD-------------
General information:
TITO was launched using:
RESULT:
Template:
2VE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1854 for 441 contacts (4.2/contact) +
2D Compatibility (PS) -6831 + (NN) -873 + (LL) 3336
1D Compatibility (HY) 800 + (ID) 400
Total energy: -2114.0 ( -4.79 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_2VE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VE8-query.scw
PDB file :
Tito_Scwrl_2VE8.pdb
: