Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGML---------------EKFYKAGKRIDKDYKKQV-VELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGELFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCKENE---KTLVIGGGNSAVEYAIALCKTTP--TTLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEEDNTQIKVNFTDNTSESFDRLLYAIGGSTPLE--FFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 2YQU Chain:A ((1-304)) | ----MYDLLVIGAGPGGYVAAIRAAQLGM-KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGT----ARFLSERKVLVEETGEELEARYILIATGS--APLIPPWAQVD---YERVVTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIP-VDEHLRT-RVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGFGHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130672 for 2162 contacts (-60.4/contact) +
2D Compatibility (PS) -29599 + (NN) -5452 + (LL) 1284
1D Compatibility (HY) -17200 + (ID) 3250
Total energy: -184889.0 ( -85.52 by residue)
QMean score : 0.410
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