Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD
2E35 Chain:A ((2-139))
--KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTPPASYLIRKAAGLEKGAHKPGREKVGRITWEQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVEVVG
General information:
TITO was launched using:
RESULT:
Template:
2E35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34585 for 968 contacts (-35.7/contact) +
2D Compatibility (PS) -15034 + (NN) -8695 + (LL) 352
1D Compatibility (HY) -12000 + (ID) 4250
Total energy: -74212.0 ( -76.67 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2E35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E35-query.scw
PDB file :
Tito_Scwrl_2E35.pdb
: