Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQVLALNYGSKNELSRAFKSLLEN------PPNHINNIESLENEISHRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
3SGX Chain:A ((19-238))
-----RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSE-----------LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQID-----EEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFAN----------
General information:
TITO was launched using:
RESULT:
Template:
3SGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102971 for 1532 contacts (-67.2/contact) +
2D Compatibility (PS) -21337 + (NN) -5137 + (LL) 2012
1D Compatibility (HY) -14400 + (ID) 4450
Total energy: -146283.0 ( -95.48 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3SGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SGX-query.scw
PDB file :
Tito_Scwrl_3SGX.pdb
: