Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTATEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQ-NDWAEIEF-SHETKGYVFLKLLKKAE |
| 2HBW Chain:A ((17-76)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------EYQCLAALNLYDSPECTS-LATQAAVGRHLQVTSNQQGAAVEVCLCEDDYPGWLSLGDLGLLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18047 for 390 contacts (-46.3/contact) +
2D Compatibility (PS) -5990 + (NN) 3700 + (LL) 11764
1D Compatibility (HY) -400 + (ID) 400
Total energy: -9373.0 ( -24.03 by residue)
QMean score : 0.539
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