Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQAIYNETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV
4KAW Chain:X ((13-184))
------------MEKAVAVARDDLSTIRTGRANPGMFSGITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLE-
General information:
TITO was launched using:
RESULT:
Template:
4KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34600 for 1215 contacts (-28.5/contact) +
2D Compatibility (PS) -18557 + (NN) -6918 + (LL) 1376
1D Compatibility (HY) -10000 + (ID) 3200
Total energy: -71899.0 ( -59.18 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_4KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAW-query.scw
PDB file :
Tito_Scwrl_4KAW.pdb
: