Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSVLENILKDKLLEVAVLKKNHALPINIAPSDRDFKKALLEKKTSFILEYKKASPSKGLIRKDFDLLEITKTYEKF-ASCVSVLADSKYFLGSYENIKIVSQHSTKPILCKDFIIDAFQIKLARVMGSNAVLLMLSVLDDKNYLELFNLAKSLNMSVLTEVSNQQEIERLLKLQYDIIGINNRDLHTLKTDIFHTLELRPLLPKDAIIISESGIYSHAQIKALAPC-VNGFLVGSSLMKEKDLKKACIKLIL-GENKVCGLTRIKDAKAVYKNHFIYGGLIFEKSSPRYIKPKEALKITKAVKKLDFVGVFVKDKIKKIAKIAKKLDLKAVQLYGYSQKEIAQLKKSLPKTCAIWQVVSVADSKDLAPKTKEASLILYDTKGDKMGGNGVSFDWEILENAKTPFMLAGGLNLDNIQKALKIKALGLDFNSGLEISPGIKNKDKIKQLARILREY |
| 3T78 Chain:A ((42-263)) | ----------------------------------DVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTL--DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3T78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157205 for 1888 contacts (-83.3/contact) +
2D Compatibility (PS) -23438 + (NN) -10510 + (LL) 16784
1D Compatibility (HY) -10400 + (ID) 3700
Total energy: -188469.0 ( -99.82 by residue)
QMean score : 0.467
|
|
|