Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVIFSVSNALLFVGVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFVVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALICWLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA |
1V4E Chain:A ((67-91)) | -----------------------------------------------------LAALELVHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFAGMEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQMFENRDWSGLMSFMREKGILKECEETLKVLVKNVIIENSWLRDF------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1V4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3097 for 94 contacts (32.9/contact) +
2D Compatibility (PS) -2773 + (NN) -2884 + (LL) 6296
1D Compatibility (HY) 0 + (ID) 150
Total energy: 3586.0 ( 38.15 by residue)
QMean score : 0.171
|
|
|