Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLSGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIAPEMFKSGGWLHAKLALVVLLLIYHFYCKKCMRELEKDPTGKNARFYRVFNEIPTILMILIVILVVVKPF
4DOY Chain:E ((93-141))
---------WPTAIEVVREIA--AADGSLGHLFGYHLTNAPMIELIG-SQEQEEHLYTQIAQNNWWTGNASSENNSHVLDWKVSATPTEDGGYVLNGTKHFCSGAKGSDLLFVFGVVQDDSPQQGAIIAAAIPTSRAGVTPNDDWAAI
General information:
TITO was launched using:
RESULT:
Template:
4DOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12722 for 249 contacts (-51.1/contact) +
2D Compatibility (PS) -5099 + (NN) -1826 + (LL) 1376
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -21371.0 ( -85.83 by residue)
QMean score : 0.084
(partial model without unconserved sides chains):
PDB file :
Tito_4DOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DOY-query.scw
PDB file :
Tito_Scwrl_4DOY.pdb
: