Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDV-FKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDT-QALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAK--FEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHFDTIH------------------TLDI-------LDCNAGDHK---RPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVW--------AYPQ-----------IGEMDSYLLYHEELESLVKNVKGLR---RARFF-MTFSQNY-LTH-MKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQD------KTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
| 2PH5 Chain:A ((13-429)) | KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQYG----VSFKLQQITPQNYLEVIGSTLE--ENDFLIDVSIGISSLALIILCNQKGALYINAATEPWKE---RRTNYSLREEVLRLKDKTQKTALITHGANPGLVSHFIKEALL-NIAKDNGLTINRPKNAAEWANLAMTLGIKVIHVAEQDSQVTYPPKSPGEFVNTWSANGLILEGLQPAEIGWGTHEAHWPHDAYSHSNGPQCAIYLSRPSAGVMVRSWTPTLGAFHGFLITHAETISLTNFLT-LKNGSELLYRPTVHYAYNPCPDARLSIFELKSNEW-----------KPQNKNRLILNE--II---DGCDELGVLLMGNQRGAYWYGSTLSIQEAR------QIAPYNNATSLQVVAS-MISGIIWA---IEHPD----EGIVEPEEVDHQYIIDIAKPYLGKVGGYYT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97968 for 2722 contacts (-36.0/contact) +
2D Compatibility (PS) -35374 + (NN) -3949 + (LL) 2692
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -142999.0 ( -52.53 by residue)
QMean score : 0.271
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