Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNE-MSVLALENLRVLLS--EHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
3G4A Chain:A ((35-220))
----------------AVRAARVSFDMGLKDEERDRHLIEYLMK-HGHETPFEHIVFTFHVKAPIFVARQWF-RHRIASYNELAGRYSKLSY---EFYIP----SPERLEGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKY
General information:
TITO was launched using:
RESULT:
Template:
3G4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42885 for 1257 contacts (-34.1/contact) +
2D Compatibility (PS) -18883 + (NN) -2998 + (LL) 2204
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -76562.0 ( -60.91 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_3G4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G4A-query.scw
PDB file :
Tito_Scwrl_3G4A.pdb
: