Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTIGSLVLSGVGLAGSFIVSHKPRLGGAMMVAAAIGCTMSISIMFLLPIVLLAVGGLIALINYEEAASVEE
4FTU Chain:A ((73-130))
-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7844 for 227 contacts (-34.6/contact) +
2D Compatibility (PS) -5628 + (NN) 1067 + (LL) 5232
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -9573.0 ( -42.17 by residue)
QMean score : -0.353
(partial model without unconserved sides chains):
PDB file :
Tito_4FTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTU-query.scw
PDB file :
Tito_Scwrl_4FTU.pdb
: