Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKH-AATTFTIHDKETDKVVFTGKSYQNA---TETGNFVILDFSDLQTVGE-YYLKFAD-----MQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVF-------GK-HTTCHAD------II-AE------------HDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE-----------------ETLRMRLLEEGEWGLDFILKTRFGDGFR---AT----SAGMTRWTDGLVGGMDDAIARV--HNQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKP---IFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEK-AGI-RDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE---ITGEIPVGMET-FRNE-----------------DEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 1UT9 Chain:A ((210-814)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQPDVRVNQVGYLPEGKKVATVVCNSTQPVKWQLKN-AAGVVVLEGYTEPKGLDKDSQDYVHWLDFSDFATEGIGYYFELPTVNSPTNYSHPFDIRK--DIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYDAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYA-EYTPGSGGPGGGPYND--DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMG--ANGED--NGLWGCFTWGTTQGLGTITLALVE--------------NGLPATDIQKARNNIAKAADRWLENIE-EQGYRLPIKQAE-----------------------------------DERGGY-----PW----GSNSFILNQMIVMGYAYDFTGDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGGPNSRFEDPTINAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115191 for 4666 contacts (-24.7/contact) +
2D Compatibility (PS) -53423 + (NN) -12668 + (LL) 18136
1D Compatibility (HY) -8000 + (ID) 4650
Total energy: -175796.0 ( -37.68 by residue)
QMean score : 0.398
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