Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITIIAAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKSYGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAALVSITMLAKFSKSKKLKISMPESVPPAIAKSFN---ILIPSFLVLSILAIIEVLVVSFVSMSIPEIIVKVLQIPLVGGFQTLPGILLYVFLAG-FLWVFGIHGAFVLGAISGPVLLTSLQQNIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIPSIFNVSEPLMFGLPVVFNPIY-----GIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPPVLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV--- |
| 4QPP Chain:A ((48-376)) | -------YYECYSDVSVHEEMIADRVRTDAYRLGILR--------------NWAALRGK-----------TVLDVG-----AGTGILSIFCAQAGAR---RVYAVEASA--IWQQAREVVRFNGLEDRVHVLP-----GPVETVELPEQ---VDAIVSEWMGYGLLHE---------SMLSSVLHARTKWLKEGGLLLPASAELFIVPI------SDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVL---ARPQRFAQLE---------------LSRAGLEQELEAGVGGRFRCSCYG--------------------------SAPMHGFAIWFQVTFPGGESEKPLVLS----TSPFHPATHWK-QALLYLNEPVQVEQ--------DTDVS-----------GEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306405 for 2574 contacts (-119.0/contact) +
2D Compatibility (PS) -32950 + (NN) 9954 + (LL) 11964
1D Compatibility (HY) -12400 + (ID) 3800
Total energy: -333637.0 ( -129.62 by residue)
QMean score : 0.123
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