Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFQLMIFMIIRVFYFAIFYLLENEILVTAQFITNAYITLCIIWVISFAIFSFRFKKKLDKGGYRKDSKLQQKRSNLGLNLSKGTYFLILGSFGLFILIRMLIGGELEEIIISLFLIVCILIGIAGVSLFPEHLFTAYCKFNFKEFHIEE |
1GPK Chain:A ((295-342)) | -------------------------------------------VIDGEFFPTSLESMLNSGNFKKTQIL------LGVNKDEGSFFLLYGAPGF------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4503 for 169 contacts (-26.6/contact) +
2D Compatibility (PS) -4530 + (NN) 1522 + (LL) 12068
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -993.0 ( -5.88 by residue)
QMean score : 0.086
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