Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFSIGEFSELVGIPSSTLRFYEKEGLITP---DRDKNNLRTYSEEDANWLKFLLHLKGAGLSIEELKQYT--------IWRTAGDSTISERLNMLKEKKIVLEQEIENLQKDLDTVVRKIGIYEEKVAKLDV
3D70 Chain:A ((6-112))
--YSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPD-TSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLS----ALEQTISLVKKRM-------------------
General information:
TITO was launched using:
RESULT:
Template:
3D70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33535 for 547 contacts (-61.3/contact) +
2D Compatibility (PS) -10527 + (NN) -8080 + (LL) 2496
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -59296.0 ( -108.40 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3D70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D70-query.scw
PDB file :
Tito_Scwrl_3D70.pdb
: