Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY-- |
| 1QB7 Chain:A ((1-236)) | PFKEVSPNSFLLDDSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE-------IPFVLMRKADKNAG------------LLIRSEPYEKEYKE-AAPEVMTIR-------YGSIGKGSRVVLIDDVLATGGTALSG--LQLVEASDAVVVEMVSILSIPFLK------------AAEKIHSTANSRYKDIKFISLLSDDALTEENCGDSKNYTGPRVLS-CGDVLAEHPH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247897 for 1748 contacts (-141.8/contact) +
2D Compatibility (PS) -23406 + (NN) 4440 + (LL) 4144
1D Compatibility (HY) 800 + (ID) 1450
Total energy: -263369.0 ( -150.67 by residue)
QMean score : 0.194
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