Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNG-TVKMKDKF-PTTAKSAEELVAQMV----EKWRPYRTEVKGIAVSCPGVVDTEKGVIYQGGSLLF-MHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFG-----RTGSAVELIKRIASK---------KNLPNKKD---GEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
| 2YHY Chain:A ((33-297)) | --LAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMA---LQREAKKLHDEDLLLVEGMS----AVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASH------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115928 for 1815 contacts (-63.9/contact) +
2D Compatibility (PS) -25926 + (NN) -14887 + (LL) 4968
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -168523.0 ( -92.85 by residue)
QMean score : 0.503
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