Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDRKANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIEMKKKLHRGM
2LYL Chain:A ((1-61))
-----MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25300 for 433 contacts (-58.4/contact) +
2D Compatibility (PS) -6590 + (NN) -1658 + (LL) 4072
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -36776.0 ( -84.93 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_2LYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYL-query.scw
PDB file :
Tito_Scwrl_2LYL.pdb
: