Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVII-QSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKTKQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGAIL-FADNKKLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCY-GKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALTISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 3G8Q Chain:A ((1-278)) | MKVSLAGQTVD--VKKILNEIP---------------------KRTVTAALLE----------GGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSG----VEVVEVHPDEPLGYDPV--DRLDVLLTFGGNPYL---TEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFL-----ISGEF-------DRDELRERILEDIEPRILD-----------------------------PFAVRARIARAGA------------FSSSREAEVFIGDVLTSVGREVNLNDPR----TVVTVDVLGPRV---SVGVEKR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23251 for 2276 contacts (-10.2/contact) +
2D Compatibility (PS) -29245 + (NN) -1628 + (LL) 6108
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -63116.0 ( -27.73 by residue)
QMean score : 0.329
|
|
|