Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDI-----VLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTY----MTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
4LYK Chain:A ((33-265))
----------ALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIK----LVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVP-----------
General information:
TITO was launched using:
RESULT:
Template:
4LYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111344 for 1749 contacts (-63.7/contact) +
2D Compatibility (PS) -23643 + (NN) -7011 + (LL) 2160
1D Compatibility (HY) -18400 + (ID) 3200
Total energy: -161438.0 ( -92.30 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_4LYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LYK-query.scw
PDB file :
Tito_Scwrl_4LYK.pdb
: