Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFSIISGVIFYYAGGGYKGKKIKIPKKWLDRRRNVNRIDFLQSVNIKDFVVKDKHLRNSTAKRARKFDAETSEEANLIVQDALKNGKVKKIEDNGLGSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTVYPVPAP |
4USO Chain:A ((18-83)) | --------------------------------------------------------------------------------------------------------------------------------------TLSAGNYIIYNRVLSPRGEKLALTYPGRQRTPVTVSPLD-----GSSEQAWILRSYDSNSNTWTISPVGSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16585 for 349 contacts (47.5/contact) +
2D Compatibility (PS) -7295 + (NN) -2244 + (LL) 9520
1D Compatibility (HY) -800 + (ID) 900
Total energy: 14866.0 ( 42.60 by residue)
QMean score : 0.234
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