Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDILARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF |
| 2H3J Chain:A ((20-38)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SN-GYRQRLFSMGLLPGAAL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -772 for 67 contacts (-11.5/contact) +
2D Compatibility (PS) -1924 + (NN) -813 + (LL) 25428
1D Compatibility (HY) -400 + (ID) 0
Total energy: 21519.0 ( 321.18 by residue)
QMean score : 0.361
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