Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLERLDEDKIVLDVKAHF-IPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKELQVDNVEHPD-TQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEVYMVRPWSEGENDTNINY |
2VF3 Chain:A ((5-246)) | --IKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIR-----EGVLRVETNIGIPQEE-NLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYAEEKIQRIISGEVEEI----ENVLGDIARELYPEINEVY-RFVEYLGFKPFVSGSGSTVY---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109600 for 1984 contacts (-55.2/contact) +
2D Compatibility (PS) -25967 + (NN) -6671 + (LL) 3548
1D Compatibility (HY) -20000 + (ID) 3950
Total energy: -162640.0 ( -81.98 by residue)
QMean score : 0.392
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